Friday, September 30, 2011

Nordic Microalgae

This sure looks good:
Nordic Microalgae

Thursday, September 22, 2011

Blue-greens in České Budějovice

It's already a month ago, that I was on the Determination Course of Freshwater and Terrestrial Cyanobacteria in Czech Republic, in this beautiful city of České Budějovice, about 150 km south of the ever so wonderful city of Prague.

We had a very intensive and highly interesting week going through the newest developments in the taxonomy of Cyanobacteria, under the kind and inspiring guidance of Prof. Komárek the Great:




You could also get individual lessons: (Thank you for the photo, Oriana!)

Here is our wonderful Cyanobacteria group all together on the market place of České Budějovice:

(Sorry, don't know who's photo' the rest is. One of the dear participants. Or even so organisers. I hope it's fine that the photo's are here.)

Wednesday, September 21, 2011

The other way round

With an up-right microscope one puts the slide the other way round on the stage than when using an inverted microscope. I should know it by now...

But I was becoming a bit desperate while calibrating the 40x PlanApo Oil objective on my up-right Zeiss microscope and I did not get the stage micrometer sharp. The 10x objective showed the lines alright. So why not the 40x objective?? Did the micrometer move with the oil? Should I turn the objective just a little bit closer? Afraid of breaking either the micrometer or - even worse - the objective, I was becoming quite anxious.

And then it struck me. I checked how did I put the micrometer on the stage. Upside down, of course. I am an inverted microscope user indeed. So I turned the slide and calibrated the objective.

Tuesday, September 20, 2011

Home of Staurastrum sexcostatum

Was on my last sample trip last Sunday and took some water out of the ditch, near to my favorite lake. And this is what I found:










Size 38x48 µm.

Lots of them. Seems to be the home of Staurastrum sexcostatum Brébisson ex Ralfs 1848. According to Coesel & Meesters (2007) it particularly occurs in ephemeral pools. Might well be, that this ditch gets dry in the summer. In the Netherlands it's rare, Coesel and Meesters state. The same thing is told us by John and Williamson (2009) and they are referring to West of Ireland. Lenzenweger (1997) let's us know that this species has been but rarely found in the Alps of Austria. He seems to have seen slightly smaller cells than the others, by the way. Ralfs stated in his book The British Desmidieae in 1848, that this species was very rare, whereas West, West & Carter (1923) 75 years later do mention quite a few places, where it has been found. Finland was not mentioned here, though.

But it is here. Tikkanen (1986) does not mention it, but it's on the official phytoplankton list maintained by the Finnish Environmental Administration. It's not yet on the Finnish Phytoplankton net guide, but it probably will be, soon.


Literature
Coesel, Peter F.M. & Meesters, Koos (J.) 2007. Desmids of the Lowlands. Mesotaeniaceae and Desmidiaceae of the European Lowlands. KNNV, Zeist.

John, D.M. & Williamson D.B. 2009. A practical guide to the Desmids of the West of Ireland. MRI.

Lenzenweger R. (1997) Desmidiaceenflora von Österreich.
Teil 2. Bibliotheca Phycologica, Vol. 102.
J. Cramer, Berlin & Stuttgart.

Ralfs, J. (1848). The British Desmidieae. pp. [i]-xxii, [i], [1]-226, pls I-XXXV. London: Reeve, Benham & Reeve.


Tikkanen, Toini 1986. Kasviplanktonopas. Suomen Luonnonsuojeluliiton tuki Oy. Helsinki.

West, West & Carter (1923) A Monograph of the British Desmidiaceae, Vol. 5. Ray Society, London.


Monday, September 12, 2011

Immersion oil

My Zeiss immersion oil ran out. No worries, I had another one. This one was Olympus. And as it turned out, a bit thinner. And viscosity of immersion oil is quite a critical characteristic when using an inverted microscope.

On the bottles I can't find any kind of direct information about the viscosity, strange enough. The refractive index is mentioned, though. Also a very critical phenomenon. Zeiss had it 0,002 higher than Olympus. That shall not make the difference.

Again, while visiting the Netherlands, my dear colleague and a the Great Microscope Man René van Wezel told me a thing or two about the secret life of immersion oil. Here you can find some more information on the subject: Cargille and Olympus.

So it became clear that I will stick to Type B immersion oil with a higher viscosity, 1250 centistokes (cSt or mm2/s) as it is called. I might even try the NVH type with the viscosity of 21000 cSt.

Friday, September 9, 2011

Connected

I'm now connected to the EnvPhyto phytoplankton counting program that runs at the Finnish Environment Institute in Helsinki. :) EnvPhyto is again connected with the national environmental database, Hertta. This together makes it possible to combine the algae count results with the known environmental parameters of the lake, like depth, catchment area, pH, P, N etc etc. At once.

Wednesday, September 7, 2011

Navicula reinhardtii

While visiting my colleagues in the Netherlands we discussed this peculiar Navicula from the Dutch waters, that I was not able to give a name to. Geurt Verweij - a far more competent diatomist than I ever will be - gave his opinion on the subject: Navicula reinhardtii.



Size= 15 x 34 µm

I had seen this little fellow many times. The structure in the middle of the scale is quite special, with long an short striae. Geurt pointed out, that the end of the raphe is curved. Yes, I could see that. And, what's even more specific is that the other end is curved to the opposite direction. Seems to be exceptional for Navicula s. str., according to Lange-Bertalot (2001). With some difficulty I could see even this. I mean the raphe curving the other way, not the exceptionality in it.

So, there is a new diatom-buddy for me. Navicula reinhardtii (A. Grunow) A. Grunow in P.T. Cleve et J.D. Möller 1877. According to the Dutch TWN-list there are no synonyms, but in both the books, Süsswasserflora 2/1 (1997) and Diatoms of Europe (2001) Stauroneis reinhardtii is mentioned as a synonym. Hmm...
Here is some more information about this species: Common Freshwater Diatoms of Britain and Ireland A multiaccess key. Seems to be very sensitive to pollution, according to the France IPS, and alkalibiontic. No wonder I've not seen it in Finland. ;)

Literature:
Krammer, K. & H. Lange-Bertalot, 1997. Bacillariophyceae. 1.Teil: Naviculaceae. Julk.: Ettl, H.,
Gerloff, J., Heynig, H. & Mollenhauer D. (toim.). Süsswasserflora von Mitteleuropa,
Band 2. Stuttgart, Gustav Fischer Verlag, Jena. 876 s.

Lange-Bertalot, H. 2001. Diatoms of Europe, Volume 2: Navicula Sensu Stricto, 10 Genera Separated from Navicula Sensu Lato, Frustulia. A.R.G Gantner Verlag K.G., Ruggel. 526 s.